Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cd40P27512 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cd40P27512 Gm6973-201ENSMUST00000117080 721 ntBASIC13.34□□□□□ -0.27
Cd40P27512 Gm11543-201ENSMUST00000120758 370 ntBASIC13.34□□□□□ -0.27
Cd40P27512 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd40P27512 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd40P27512 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.34□□□□□ -0.27
Cd40P27512 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.34□□□□□ -0.27
Cd40P27512 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.34□□□□□ -0.27
Cd40P27512 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Cd40P27512 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd40P27512 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd40P27512 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cd40P27512 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40P27512 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40P27512 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40P27512 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40P27512 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cd40P27512 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.33□□□□□ -0.28
Cd40P27512 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.33□□□□□ -0.28
Cd40P27512 Gm4995-201ENSMUST00000117247 432 ntBASIC13.33□□□□□ -0.28
Cd40P27512 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Gm18737-201ENSMUST00000173594 937 ntBASIC13.33□□□□□ -0.28
Cd40P27512 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Gm9182-201ENSMUST00000217829 639 ntBASIC13.33□□□□□ -0.28
Cd40P27512 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.33□□□□□ -0.28
Cd40P27512 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cd40P27512 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cd40P27512 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.33□□□□□ -0.28
Cd40P27512 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cd40P27512 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cd40P27512 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.32□□□□□ -0.28
Cd40P27512 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Cd40P27512 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cd40P27512 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd40P27512 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.32□□□□□ -0.28
Cd40P27512 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.32□□□□□ -0.28
Cd40P27512 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.32□□□□□ -0.28
Cd40P27512 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.32□□□□□ -0.28
Cd40P27512 Gm15483-201ENSMUST00000120338 456 ntBASIC13.32□□□□□ -0.28
Cd40P27512 Gm11594-201ENSMUST00000122313 162 ntBASIC13.32□□□□□ -0.28
Cd40P27512 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.32□□□□□ -0.28
Cd40P27512 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Gm2213-201ENSMUST00000197485 688 ntBASIC13.32□□□□□ -0.28
Cd40P27512 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd40P27512 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms