Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pde6bP23440 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pde6bP23440 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pde6bP23440 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.12■□□□□ 0.17
Pde6bP23440 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Pde6bP23440 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.12■□□□□ 0.17
Pde6bP23440 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.12■□□□□ 0.17
Pde6bP23440 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pde6bP23440 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.12■□□□□ 0.17
Pde6bP23440 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pde6bP23440 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pde6bP23440 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.11■□□□□ 0.17
Pde6bP23440 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pde6bP23440 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pde6bP23440 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pde6bP23440 Gm6415-201ENSMUST00000118488 348 ntBASIC16.11■□□□□ 0.17
Pde6bP23440 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.11■□□□□ 0.17
Pde6bP23440 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pde6bP23440 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pde6bP23440 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.11■□□□□ 0.17
Pde6bP23440 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.11■□□□□ 0.17
Pde6bP23440 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.11■□□□□ 0.17
Pde6bP23440 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6bP23440 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pde6bP23440 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pde6bP23440 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6bP23440 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.1■□□□□ 0.17
Pde6bP23440 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.1■□□□□ 0.17
Pde6bP23440 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.1■□□□□ 0.17
Pde6bP23440 Gm15483-201ENSMUST00000120338 456 ntBASIC16.1■□□□□ 0.17
Pde6bP23440 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pde6bP23440 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.1■□□□□ 0.17
Pde6bP23440 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Pde6bP23440 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.1■□□□□ 0.17
Pde6bP23440 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6bP23440 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pde6bP23440 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pde6bP23440 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6bP23440 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pde6bP23440 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.09■□□□□ 0.17
Pde6bP23440 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 Mir6977-201ENSMUST00000184960 64 ntBASIC16.09■□□□□ 0.17
Pde6bP23440 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.09■□□□□ 0.17
Pde6bP23440 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.09■□□□□ 0.17
Pde6bP23440 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pde6bP23440 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6bP23440 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.09■□□□□ 0.17
Pde6bP23440 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms