Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.47□□□□□ -0.25
Cbx3P23198 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.47□□□□□ -0.25
Cbx3P23198 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
Cbx3P23198 Gm18115-201ENSMUST00000221209 621 ntBASIC13.47□□□□□ -0.25
Cbx3P23198 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cbx3P23198 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Cbx3P23198 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.47□□□□□ -0.25
Cbx3P23198 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.47□□□□□ -0.25
Cbx3P23198 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cbx3P23198 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cbx3P23198 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Gm13186-201ENSMUST00000118031 316 ntBASIC13.46□□□□□ -0.25
Cbx3P23198 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cbx3P23198 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.46□□□□□ -0.25
Cbx3P23198 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.46□□□□□ -0.25
Cbx3P23198 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.46□□□□□ -0.25
Cbx3P23198 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cbx3P23198 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.46□□□□□ -0.25
Cbx3P23198 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cbx3P23198 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cbx3P23198 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.46□□□□□ -0.26
Cbx3P23198 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Cbx3P23198 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cbx3P23198 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cbx3P23198 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cbx3P23198 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cbx3P23198 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cbx3P23198 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.45□□□□□ -0.26
Cbx3P23198 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Gm11539-201ENSMUST00000119837 557 ntBASIC13.45□□□□□ -0.26
Cbx3P23198 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cbx3P23198 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cbx3P23198 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.45□□□□□ -0.26
Cbx3P23198 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cbx3P23198 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.45□□□□□ -0.26
Cbx3P23198 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.45□□□□□ -0.26
Cbx3P23198 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cbx3P23198 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Cbx3P23198 Grk6-205ENSMUST00000224653 2976 ntBASIC13.44□□□□□ -0.26
Cbx3P23198 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms