Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp53P15975 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp53P15975 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp53P15975 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp53P15975 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp53P15975 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp53P15975 Gm15693-201ENSMUST00000120470 637 ntBASIC17.06■□□□□ 0.32
Usp53P15975 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.06■□□□□ 0.32
Usp53P15975 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp53P15975 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Usp53P15975 Gm18049-201ENSMUST00000208909 581 ntBASIC17.06■□□□□ 0.32
Usp53P15975 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.06■□□□□ 0.32
Usp53P15975 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp53P15975 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp53P15975 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp53P15975 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp53P15975 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.05■□□□□ 0.32
Usp53P15975 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.05■□□□□ 0.32
Usp53P15975 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp53P15975 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp53P15975 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm20949-201ENSMUST00000206478 952 ntBASIC17.05■□□□□ 0.32
Usp53P15975 Gm45098-201ENSMUST00000207179 657 ntBASIC17.05■□□□□ 0.32
Usp53P15975 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp53P15975 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.05■□□□□ 0.32
Usp53P15975 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp53P15975 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp53P15975 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.04■□□□□ 0.32
Usp53P15975 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp53P15975 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Gm13223-201ENSMUST00000118609 747 ntBASIC17.04■□□□□ 0.32
Usp53P15975 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp53P15975 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Usp53P15975 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Usp53P15975 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp53P15975 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp53P15975 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp53P15975 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms