Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.35□□□□□ -0.43
Ly6c1P0CW02 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ly6c1P0CW02 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ly6c1P0CW02 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Gm13263-201ENSMUST00000121271 838 ntBASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Mir6990-201ENSMUST00000183724 91 ntBASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Gm27920-201ENSMUST00000183953 96 ntBASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ly6c1P0CW02 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ly6c1P0CW02 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms