Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm12008-201ENSMUST00000117791 755 ntBASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Mir8117-201ENSMUST00000184773 107 ntBASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp6P0C0A3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Chmp6P0C0A3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Gm44492-201ENSMUST00000197012 141 ntBASIC16.06■□□□□ 0.16
Chmp6P0C0A3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.06■□□□□ 0.16
Chmp6P0C0A3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp6P0C0A3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Gm17968-201ENSMUST00000194902 784 ntBASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Chmp6P0C0A3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms