Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P06344 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P06344 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.15□□□□□ -0.3
P06344 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
P06344 Gm6973-201ENSMUST00000117080 721 ntBASIC13.15□□□□□ -0.3
P06344 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
P06344 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.15□□□□□ -0.3
P06344 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
P06344 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P06344 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
P06344 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
P06344 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.15□□□□□ -0.3
P06344 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
P06344 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.15□□□□□ -0.3
P06344 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P06344 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P06344 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.15□□□□□ -0.3
P06344 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06344 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P06344 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
P06344 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P06344 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
P06344 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.31
P06344 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
P06344 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.14□□□□□ -0.31
P06344 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.14□□□□□ -0.31
P06344 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.14□□□□□ -0.31
P06344 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.14□□□□□ -0.31
P06344 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.14□□□□□ -0.31
P06344 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.14□□□□□ -0.31
P06344 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
P06344 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06344 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
P06344 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
P06344 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.13□□□□□ -0.31
P06344 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.13□□□□□ -0.31
P06344 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.13□□□□□ -0.31
P06344 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.13□□□□□ -0.31
P06344 Gm43474-201ENSMUST00000196415 774 ntBASIC13.13□□□□□ -0.31
P06344 Gm43125-201ENSMUST00000201724 730 ntBASIC13.13□□□□□ -0.31
P06344 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.13□□□□□ -0.31
P06344 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.13□□□□□ -0.31
P06344 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P06344 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms