Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.97□□□□□ -0.33
P04224 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P04224 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
P04224 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.97□□□□□ -0.33
P04224 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P04224 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.97□□□□□ -0.33
P04224 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.97□□□□□ -0.33
P04224 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.97□□□□□ -0.33
P04224 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
P04224 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.97□□□□□ -0.33
P04224 Rubie-203ENSMUST00000227803 2430 ntBASIC12.97□□□□□ -0.33
P04224 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.97□□□□□ -0.33
P04224 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
P04224 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
P04224 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.96□□□□□ -0.33
P04224 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
P04224 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
P04224 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04224 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
P04224 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
P04224 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P04224 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P04224 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
P04224 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
P04224 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P04224 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P04224 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
P04224 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P04224 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
P04224 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.95□□□□□ -0.34
P04224 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
P04224 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.95□□□□□ -0.34
P04224 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.95□□□□□ -0.34
P04224 Gm5587-201ENSMUST00000206270 674 ntBASIC12.95□□□□□ -0.34
P04224 Gm10252-201ENSMUST00000209541 832 ntBASIC12.95□□□□□ -0.34
P04224 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.95□□□□□ -0.34
P04224 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.95□□□□□ -0.34
P04224 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.95□□□□□ -0.34
P04224 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.95□□□□□ -0.34
P04224 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
P04224 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
P04224 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P04224 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P04224 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms