Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
P04214 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.32■□□□□ 0.04
P04214 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
P04214 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Gm5356-201ENSMUST00000093326 615 ntBASIC15.32■□□□□ 0.04
P04214 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.32■□□□□ 0.04
P04214 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
P04214 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04214 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P04214 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
P04214 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
P04214 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P04214 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Gm12742-201ENSMUST00000117326 410 ntBASIC15.31■□□□□ 0.04
P04214 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.31■□□□□ 0.04
P04214 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.31■□□□□ 0.04
P04214 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.31■□□□□ 0.04
P04214 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.31■□□□□ 0.04
P04214 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.31■□□□□ 0.04
P04214 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P04214 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.31■□□□□ 0.04
P04214 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04214 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Gm12390-201ENSMUST00000117897 397 ntBASIC15.3■□□□□ 0.04
P04214 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.3■□□□□ 0.04
P04214 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.3■□□□□ 0.04
P04214 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
P04214 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
P04214 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Gm18307-201ENSMUST00000206864 949 ntBASIC15.3■□□□□ 0.04
P04214 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.3■□□□□ 0.04
P04214 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.3■□□□□ 0.04
P04214 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
P04214 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04214 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.29■□□□□ 0.04
P04214 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.29■□□□□ 0.04
P04214 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P04214 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P04214 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P04214 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P04214 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.29■□□□□ 0.04
P04214 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.29■□□□□ 0.04
P04214 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.29■□□□□ 0.04
P04214 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.29■□□□□ 0.04
P04214 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
P04214 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
P04214 Gm6244-201ENSMUST00000178732 841 ntBASIC15.29■□□□□ 0.04
P04214 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.29■□□□□ 0.04
P04214 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04214 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
P04214 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.29■□□□□ 0.04
P04214 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.29■□□□□ 0.04
P04214 Gm45841-201ENSMUST00000207700 164 ntBASIC15.29■□□□□ 0.04
P04214 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms