Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H3f3cP02301 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
H3f3cP02301 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
H3f3cP02301 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H3f3cP02301 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H3f3cP02301 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H3f3cP02301 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H3f3cP02301 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
H3f3cP02301 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.67□□□□□ -0.38
H3f3cP02301 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.67□□□□□ -0.38
H3f3cP02301 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.67□□□□□ -0.38
H3f3cP02301 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H3f3cP02301 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H3f3cP02301 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
H3f3cP02301 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
H3f3cP02301 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
H3f3cP02301 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.66□□□□□ -0.38
H3f3cP02301 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.66□□□□□ -0.38
H3f3cP02301 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Mir3113-201ENSMUST00000175478 76 ntBASIC12.66□□□□□ -0.38
H3f3cP02301 Gm8000-201ENSMUST00000188378 592 ntBASIC12.66□□□□□ -0.38
H3f3cP02301 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.66□□□□□ -0.38
H3f3cP02301 Gm17968-201ENSMUST00000194902 784 ntBASIC12.66□□□□□ -0.38
H3f3cP02301 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.66□□□□□ -0.38
H3f3cP02301 Thap2-203ENSMUST00000218989 527 ntBASIC12.66□□□□□ -0.38
H3f3cP02301 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.66□□□□□ -0.38
H3f3cP02301 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
H3f3cP02301 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3f3cP02301 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H3f3cP02301 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.66□□□□□ -0.38
H3f3cP02301 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
H3f3cP02301 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H3f3cP02301 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms