Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a20bO88575 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a20bO88575 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a20bO88575 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a20bO88575 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.01■□□□□ 0.15
Slc6a20bO88575 Gm12341-201ENSMUST00000119724 503 ntBASIC16.01■□□□□ 0.15
Slc6a20bO88575 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.01■□□□□ 0.15
Slc6a20bO88575 Gm45331-201ENSMUST00000209868 554 ntBASIC16.01■□□□□ 0.15
Slc6a20bO88575 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.01■□□□□ 0.15
Slc6a20bO88575 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a20bO88575 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16■□□□□ 0.15
Slc6a20bO88575 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Slc6a20bO88575 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16■□□□□ 0.15
Slc6a20bO88575 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Slc6a20bO88575 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Gm4691-201ENSMUST00000182339 1000 ntBASIC16■□□□□ 0.15
Slc6a20bO88575 Gm2451-201ENSMUST00000199447 999 ntBASIC16■□□□□ 0.15
Slc6a20bO88575 Gm10290-201ENSMUST00000200451 999 ntBASIC16■□□□□ 0.15
Slc6a20bO88575 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Slc6a20bO88575 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Slc6a20bO88575 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a20bO88575 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Gm12585-201ENSMUST00000117307 290 ntBASIC15.99■□□□□ 0.15
Slc6a20bO88575 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Gm5354-201ENSMUST00000182417 973 ntBASIC15.99■□□□□ 0.15
Slc6a20bO88575 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Gm6916-202ENSMUST00000205523 195 ntBASIC15.99■□□□□ 0.15
Slc6a20bO88575 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a20bO88575 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.98■□□□□ 0.15
Slc6a20bO88575 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Slc6a20bO88575 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms