Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cops6O88545 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cops6O88545 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cops6O88545 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cops6O88545 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.95■□□□□ 0.46
Cops6O88545 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Gm4875-201ENSMUST00000118257 786 ntBASIC17.95■□□□□ 0.46
Cops6O88545 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Cops6O88545 Gm11424-201ENSMUST00000121929 829 ntBASIC17.95■□□□□ 0.46
Cops6O88545 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Gm24694-201ENSMUST00000180054 110 ntBASIC17.95■□□□□ 0.46
Cops6O88545 Gm27663-201ENSMUST00000184839 110 ntBASIC17.95■□□□□ 0.46
Cops6O88545 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.95■□□□□ 0.46
Cops6O88545 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Cops6O88545 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cops6O88545 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cops6O88545 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.94■□□□□ 0.46
Cops6O88545 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Cops6O88545 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.94■□□□□ 0.46
Cops6O88545 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cops6O88545 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cops6O88545 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cops6O88545 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cops6O88545 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cops6O88545 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
Cops6O88545 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cops6O88545 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.93■□□□□ 0.46
Cops6O88545 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Cops6O88545 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cops6O88545 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.93■□□□□ 0.46
Cops6O88545 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cops6O88545 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.92■□□□□ 0.46
Cops6O88545 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.92■□□□□ 0.46
Cops6O88545 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cops6O88545 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms