Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.67□□□□□ -0.22
Capns1O88456 Gm5264-201ENSMUST00000190584 848 ntBASIC13.67□□□□□ -0.22
Capns1O88456 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.67□□□□□ -0.22
Capns1O88456 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.67□□□□□ -0.22
Capns1O88456 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.67□□□□□ -0.22
Capns1O88456 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.67□□□□□ -0.22
Capns1O88456 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Capns1O88456 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.67□□□□□ -0.22
Capns1O88456 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Capns1O88456 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Capns1O88456 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Capns1O88456 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.66□□□□□ -0.22
Capns1O88456 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Gm27702-201ENSMUST00000184512 56 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Gm44357-201ENSMUST00000195897 142 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Gm19658-201ENSMUST00000196231 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44367-201ENSMUST00000196836 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44350-201ENSMUST00000197197 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44390-201ENSMUST00000197533 144 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44313-201ENSMUST00000198018 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44486-201ENSMUST00000198508 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44454-201ENSMUST00000198541 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44314-201ENSMUST00000199263 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44394-201ENSMUST00000199558 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44484-201ENSMUST00000199873 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44466-201ENSMUST00000200264 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Gm44359-201ENSMUST00000200671 138 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.66□□□□□ -0.22
Capns1O88456 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.66□□□□□ -0.22
Capns1O88456 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Capns1O88456 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Capns1O88456 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.65□□□□□ -0.22
Capns1O88456 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Capns1O88456 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Capns1O88456 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Capns1O88456 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.65□□□□□ -0.22
Capns1O88456 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.65□□□□□ -0.22
Capns1O88456 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Capns1O88456 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms