Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc4a4O88343 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Slc4a4O88343 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc4a4O88343 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Gm9726-201ENSMUST00000180321 678 ntBASIC17.4■□□□□ 0.38
Slc4a4O88343 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.4■□□□□ 0.38
Slc4a4O88343 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc4a4O88343 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc4a4O88343 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Slc4a4O88343 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.39■□□□□ 0.38
Slc4a4O88343 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Slc4a4O88343 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Slc4a4O88343 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Gm9824-201ENSMUST00000178707 561 ntBASIC17.39■□□□□ 0.37
Slc4a4O88343 Mir6956-201ENSMUST00000183598 62 ntBASIC17.39■□□□□ 0.37
Slc4a4O88343 Gm45098-201ENSMUST00000207179 657 ntBASIC17.39■□□□□ 0.37
Slc4a4O88343 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.39■□□□□ 0.37
Slc4a4O88343 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc4a4O88343 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.39■□□□□ 0.37
Slc4a4O88343 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc4a4O88343 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc4a4O88343 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.38■□□□□ 0.37
Slc4a4O88343 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.38■□□□□ 0.37
Slc4a4O88343 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Slc4a4O88343 Efs-202ENSMUST00000227037 2540 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.38■□□□□ 0.37
Slc4a4O88343 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.38■□□□□ 0.37
Slc4a4O88343 Gm13015-201ENSMUST00000118674 204 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Gm15920-201ENSMUST00000118998 402 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.38■□□□□ 0.37
Slc4a4O88343 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc4a4O88343 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.38■□□□□ 0.37
Slc4a4O88343 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc4a4O88343 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.37■□□□□ 0.37
Slc4a4O88343 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms