Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SncaO55042 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SncaO55042 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.24□□□□□ -0.45
SncaO55042 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SncaO55042 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.24□□□□□ -0.45
SncaO55042 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.24□□□□□ -0.45
SncaO55042 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Gm6296-201ENSMUST00000222599 943 ntBASIC12.24□□□□□ -0.45
SncaO55042 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.24□□□□□ -0.45
SncaO55042 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.24□□□□□ -0.45
SncaO55042 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SncaO55042 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SncaO55042 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SncaO55042 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SncaO55042 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.23□□□□□ -0.45
SncaO55042 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.23□□□□□ -0.45
SncaO55042 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 Gm27646-201ENSMUST00000183989 110 ntBASIC12.23□□□□□ -0.45
SncaO55042 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SncaO55042 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.23□□□□□ -0.45
SncaO55042 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.23□□□□□ -0.45
SncaO55042 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SncaO55042 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SncaO55042 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SncaO55042 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SncaO55042 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.23□□□□□ -0.45
SncaO55042 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SncaO55042 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
SncaO55042 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SncaO55042 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SncaO55042 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Gm4535-201ENSMUST00000182274 558 ntBASIC12.22□□□□□ -0.45
SncaO55042 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.22□□□□□ -0.45
SncaO55042 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.22□□□□□ -0.45
SncaO55042 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SncaO55042 Gm10355-201ENSMUST00000097146 517 ntBASIC12.22□□□□□ -0.45
SncaO55042 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.22□□□□□ -0.45
SncaO55042 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SncaO55042 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms