Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf13O54965 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rnf13O54965 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf13O54965 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf13O54965 Gm27646-201ENSMUST00000183989 110 ntBASIC13.4□□□□□ -0.26
Rnf13O54965 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rnf13O54965 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf13O54965 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf13O54965 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf13O54965 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf13O54965 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf13O54965 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Rnf13O54965 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.39□□□□□ -0.27
Rnf13O54965 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.39□□□□□ -0.27
Rnf13O54965 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.39□□□□□ -0.27
Rnf13O54965 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rnf13O54965 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf13O54965 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rnf13O54965 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf13O54965 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.38□□□□□ -0.27
Rnf13O54965 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf13O54965 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf13O54965 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Gm6296-201ENSMUST00000222599 943 ntBASIC13.38□□□□□ -0.27
Rnf13O54965 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.38□□□□□ -0.27
Rnf13O54965 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.38□□□□□ -0.27
Rnf13O54965 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf13O54965 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms