Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.04■□□□□ -0
Banf1O54962 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.04■□□□□ -0
Banf1O54962 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.03■□□□□ -0
Banf1O54962 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Banf1O54962 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.03■□□□□ -0
Banf1O54962 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.03■□□□□ -0
Banf1O54962 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Gm9103-201ENSMUST00000119371 405 ntBASIC15.03■□□□□ -0
Banf1O54962 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.03■□□□□ -0
Banf1O54962 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.03■□□□□ -0
Banf1O54962 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.03■□□□□ -0
Banf1O54962 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.03■□□□□ -0
Banf1O54962 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.03■□□□□ -0
Banf1O54962 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Banf1O54962 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.03■□□□□ -0
Banf1O54962 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Banf1O54962 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Banf1O54962 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Banf1O54962 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Banf1O54962 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.02■□□□□ -0
Banf1O54962 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Banf1O54962 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Banf1O54962 Gm4899-201ENSMUST00000178708 719 ntBASIC15.02■□□□□ -0
Banf1O54962 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.02■□□□□ -0
Banf1O54962 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.02■□□□□ -0
Banf1O54962 Gm18246-201ENSMUST00000221023 728 ntBASIC15.02■□□□□ -0
Banf1O54962 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.02■□□□□ -0
Banf1O54962 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Banf1O54962 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Banf1O54962 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.02□□□□□ -0.01
Banf1O54962 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Banf1O54962 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Gm7222-201ENSMUST00000117512 906 ntBASIC15.01□□□□□ -0.01
Banf1O54962 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Banf1O54962 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.01□□□□□ -0.01
Banf1O54962 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Banf1O54962 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.01□□□□□ -0.01
Banf1O54962 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Banf1O54962 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Banf1O54962 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms