Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Matn3O35701 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.43□□□□□ -0.26
Matn3O35701 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Matn3O35701 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.43□□□□□ -0.26
Matn3O35701 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.43□□□□□ -0.26
Matn3O35701 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Matn3O35701 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.43□□□□□ -0.26
Matn3O35701 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Matn3O35701 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.43□□□□□ -0.26
Matn3O35701 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.43□□□□□ -0.26
Matn3O35701 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.43□□□□□ -0.26
Matn3O35701 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.43□□□□□ -0.26
Matn3O35701 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Matn3O35701 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Matn3O35701 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Matn3O35701 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Matn3O35701 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.42□□□□□ -0.26
Matn3O35701 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.42□□□□□ -0.26
Matn3O35701 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.42□□□□□ -0.26
Matn3O35701 Gm8825-201ENSMUST00000182565 998 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm4518-201ENSMUST00000182638 718 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm27704-201ENSMUST00000185094 107 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.42□□□□□ -0.26
Matn3O35701 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Matn3O35701 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.42□□□□□ -0.26
Matn3O35701 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.42□□□□□ -0.26
Matn3O35701 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Matn3O35701 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Matn3O35701 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Matn3O35701 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms