Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.69□□□□□ -0.54
Efnb3O35393 Gm12497-201ENSMUST00000138778 237 ntBASIC11.69□□□□□ -0.54
Efnb3O35393 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.69□□□□□ -0.54
Efnb3O35393 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.69□□□□□ -0.54
Efnb3O35393 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.69□□□□□ -0.54
Efnb3O35393 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Efnb3O35393 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Efnb3O35393 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Efnb3O35393 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.68□□□□□ -0.54
Efnb3O35393 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Efnb3O35393 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Gm4459-201ENSMUST00000118750 468 ntBASIC11.68□□□□□ -0.54
Efnb3O35393 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.68□□□□□ -0.54
Efnb3O35393 Gm25745-201ENSMUST00000174945 133 ntBASIC11.68□□□□□ -0.54
Efnb3O35393 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.68□□□□□ -0.54
Efnb3O35393 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.68□□□□□ -0.54
Efnb3O35393 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.68□□□□□ -0.54
Efnb3O35393 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.68□□□□□ -0.54
Efnb3O35393 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Efnb3O35393 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.68□□□□□ -0.54
Efnb3O35393 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Efnb3O35393 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Efnb3O35393 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Efnb3O35393 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.67□□□□□ -0.54
Efnb3O35393 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.67□□□□□ -0.54
Efnb3O35393 Gm15358-201ENSMUST00000119249 520 ntBASIC11.67□□□□□ -0.54
Efnb3O35393 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.67□□□□□ -0.54
Efnb3O35393 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.67□□□□□ -0.54
Efnb3O35393 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Efnb3O35393 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Efnb3O35393 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Efnb3O35393 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms