Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Asic1-205ENSMUST00000228185 1818 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gfra3O35118 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.77□□□□□ -0.36
Gfra3O35118 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gfra3O35118 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gfra3O35118 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.77□□□□□ -0.36
Gfra3O35118 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gfra3O35118 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gfra3O35118 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Gfra3O35118 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Gfra3O35118 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Gm5312-201ENSMUST00000203728 547 ntBASIC12.77□□□□□ -0.37
Gfra3O35118 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gfra3O35118 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gfra3O35118 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.77□□□□□ -0.37
Gfra3O35118 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gfra3O35118 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Gfra3O35118 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.77□□□□□ -0.37
Gfra3O35118 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.77□□□□□ -0.37
Gfra3O35118 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.77□□□□□ -0.37
Gfra3O35118 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.77□□□□□ -0.37
Gfra3O35118 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.77□□□□□ -0.37
Gfra3O35118 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Gfra3O35118 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gfra3O35118 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gfra3O35118 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.76□□□□□ -0.37
Gfra3O35118 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.76□□□□□ -0.37
Gfra3O35118 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Gm25925-201ENSMUST00000158314 306 ntBASIC12.76□□□□□ -0.37
Gfra3O35118 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.76□□□□□ -0.37
Gfra3O35118 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.76□□□□□ -0.37
Gfra3O35118 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Gfra3O35118 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Gfra3O35118 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gfra3O35118 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms