Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.82□□□□□ -0.52
Ndufb11O09111 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ndufb11O09111 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndufb11O09111 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Gm13148-201ENSMUST00000118892 745 ntBASIC11.82□□□□□ -0.52
Ndufb11O09111 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.82□□□□□ -0.52
Ndufb11O09111 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.82□□□□□ -0.52
Ndufb11O09111 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.82□□□□□ -0.52
Ndufb11O09111 Gm18671-201ENSMUST00000214826 683 ntBASIC11.82□□□□□ -0.52
Ndufb11O09111 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ndufb11O09111 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufb11O09111 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ndufb11O09111 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.81□□□□□ -0.52
Ndufb11O09111 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.81□□□□□ -0.52
Ndufb11O09111 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ndufb11O09111 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufb11O09111 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Celf4-206ENSMUST00000224553 1729 ntBASIC11.8□□□□□ -0.52
Ndufb11O09111 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ndufb11O09111 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.8□□□□□ -0.52
Ndufb11O09111 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.8□□□□□ -0.52
Ndufb11O09111 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ndufb11O09111 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ndufb11O09111 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms