Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hdac1O09106 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.57■□□□□ 0.4
Hdac1O09106 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.57■□□□□ 0.4
Hdac1O09106 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.57■□□□□ 0.4
Hdac1O09106 Gm7787-201ENSMUST00000216858 688 ntBASIC17.57■□□□□ 0.4
Hdac1O09106 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.57■□□□□ 0.4
Hdac1O09106 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hdac1O09106 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hdac1O09106 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.57■□□□□ 0.4
Hdac1O09106 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hdac1O09106 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hdac1O09106 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hdac1O09106 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hdac1O09106 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.56■□□□□ 0.4
Hdac1O09106 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Hdac1O09106 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hdac1O09106 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Hdac1O09106 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hdac1O09106 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.56■□□□□ 0.4
Hdac1O09106 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.56■□□□□ 0.4
Hdac1O09106 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hdac1O09106 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.56■□□□□ 0.4
Hdac1O09106 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hdac1O09106 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Hdac1O09106 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hdac1O09106 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.55■□□□□ 0.4
Hdac1O09106 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.55■□□□□ 0.4
Hdac1O09106 Gm45167-201ENSMUST00000208007 322 ntBASIC17.55■□□□□ 0.4
Hdac1O09106 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hdac1O09106 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac1O09106 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Hdac1O09106 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.54■□□□□ 0.4
Hdac1O09106 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Gm4899-201ENSMUST00000178708 719 ntBASIC17.54■□□□□ 0.4
Hdac1O09106 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Hdac1O09106 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac1O09106 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac1O09106 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac1O09106 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms