Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.22■□□□□ 0.83
Tubgcp6G5E8P0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Gm14723-201ENSMUST00000118686 215 ntBASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Gm44974-201ENSMUST00000206387 1279 ntBASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.21■□□□□ 0.83
Tubgcp6G5E8P0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Gm12585-201ENSMUST00000117307 290 ntBASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 AC154846.1-201ENSMUST00000226278 862 ntBASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tubgcp6G5E8P0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Gm27731-201ENSMUST00000185192 107 ntBASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tubgcp6G5E8P0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Gm33320-201ENSMUST00000192232 530 ntBASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Gm38241-201ENSMUST00000192641 898 ntBASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Gm6916-202ENSMUST00000205523 195 ntBASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Gm18054-201ENSMUST00000207539 555 ntBASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tubgcp6G5E8P0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Mir8109-201ENSMUST00000184375 117 ntBASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Olfr286-202ENSMUST00000205305 969 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms