Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TprF6ZDS4 Gm8062-201ENSMUST00000139696 444 ntBASIC13.56□□□□□ -0.24
TprF6ZDS4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.56□□□□□ -0.24
TprF6ZDS4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.56□□□□□ -0.24
TprF6ZDS4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TprF6ZDS4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.56□□□□□ -0.24
TprF6ZDS4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TprF6ZDS4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TprF6ZDS4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Gm4875-201ENSMUST00000118257 786 ntBASIC13.55□□□□□ -0.24
TprF6ZDS4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.55□□□□□ -0.24
TprF6ZDS4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TprF6ZDS4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TprF6ZDS4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TprF6ZDS4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.54□□□□□ -0.24
TprF6ZDS4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TprF6ZDS4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TprF6ZDS4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.54□□□□□ -0.24
TprF6ZDS4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Gm27892-201ENSMUST00000185017 106 ntBASIC13.54□□□□□ -0.24
TprF6ZDS4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TprF6ZDS4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TprF6ZDS4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.53□□□□□ -0.24
TprF6ZDS4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.53□□□□□ -0.24
TprF6ZDS4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Mir5132-201ENSMUST00000175166 71 ntBASIC13.53□□□□□ -0.24
TprF6ZDS4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.53□□□□□ -0.24
TprF6ZDS4 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.53□□□□□ -0.24
TprF6ZDS4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.53□□□□□ -0.24
TprF6ZDS4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TprF6ZDS4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms