Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb9E9Q5G2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Gm15693-201ENSMUST00000120470 637 ntBASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb9E9Q5G2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb9E9Q5G2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Gm9182-201ENSMUST00000217829 639 ntBASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb9E9Q5G2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb9E9Q5G2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Gm18766-201ENSMUST00000189811 808 ntBASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms