Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Gm12151-201ENSMUST00000121374 290 ntBASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Mir6977-201ENSMUST00000184960 64 ntBASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.53□□□□□ -0.08
Srp54bE9PXC0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Srp54bE9PXC0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Gm5479-201ENSMUST00000160578 435 ntBASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Gm27989-201ENSMUST00000184721 107 ntBASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Gm28630-201ENSMUST00000187806 498 ntBASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Srp54bE9PXC0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Gm12428-201ENSMUST00000119844 727 ntBASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.51□□□□□ -0.09
Srp54bE9PXC0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms