Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Gm16479-201ENSMUST00000121706 932 ntBASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Gm14665-201ENSMUST00000122294 557 ntBASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Gm2260-201ENSMUST00000184965 657 ntBASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a3E9PWQ3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm15393-201ENSMUST00000120499 219 ntBASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a3E9PWQ3 Gm7857-201ENSMUST00000117957 358 ntBASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Gm11667-201ENSMUST00000119828 486 ntBASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col6a3E9PWQ3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms