Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gm28043E0CXC2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Gm28043E0CXC2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.83□□□□□ -0.03
Gm28043E0CXC2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm28043E0CXC2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Gm28043E0CXC2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gm28043E0CXC2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Gm28043E0CXC2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Gm7230-201ENSMUST00000173026 815 ntBASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Gm27741-201ENSMUST00000185060 237 ntBASIC14.83□□□□□ -0.04
Gm28043E0CXC2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.83□□□□□ -0.04
Gm28043E0CXC2 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Gm28043E0CXC2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.82□□□□□ -0.04
Gm28043E0CXC2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm28043E0CXC2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Gm11452-201ENSMUST00000122376 690 ntBASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms