Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm7977-201ENSMUST00000193787 748 ntBASIC12.91□□□□□ -0.34
Rd3lB2RV38 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Rd3lB2RV38 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.91□□□□□ -0.34
Rd3lB2RV38 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.9□□□□□ -0.34
Rd3lB2RV38 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Gm27357-201ENSMUST00000183754 135 ntBASIC12.9□□□□□ -0.34
Rd3lB2RV38 Gm19164-201ENSMUST00000210667 640 ntBASIC12.9□□□□□ -0.34
Rd3lB2RV38 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.9□□□□□ -0.34
Rd3lB2RV38 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rd3lB2RV38 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rd3lB2RV38 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rd3lB2RV38 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Rubie-203ENSMUST00000227803 2430 ntBASIC12.89□□□□□ -0.35
Rd3lB2RV38 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Gm8097-201ENSMUST00000117903 829 ntBASIC12.89□□□□□ -0.35
Rd3lB2RV38 Gm12497-201ENSMUST00000138778 237 ntBASIC12.89□□□□□ -0.35
Rd3lB2RV38 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.89□□□□□ -0.35
Rd3lB2RV38 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rd3lB2RV38 Matn2-206ENSMUST00000228570 2798 ntBASIC12.89□□□□□ -0.35
Rd3lB2RV38 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms