Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm26308-201ENSMUST00000157768 69 ntBASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm5177-201ENSMUST00000183092 997 ntBASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms