Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Gm16198-201ENSMUST00000118766 670 ntBASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Gm14494-201ENSMUST00000118786 435 ntBASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6-4A0A075B6B4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6-4A0A075B6B4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Trav6-4A0A075B6B4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms