Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm18049-201ENSMUST00000208909 581 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nr1h3Q9Z0Y9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm12428-201ENSMUST00000119844 727 ntBASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm25007-201ENSMUST00000083808 133 ntBASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nr1h3Q9Z0Y9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm27618-201ENSMUST00000183671 60 ntBASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nr1h3Q9Z0Y9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm27920-201ENSMUST00000183953 96 ntBASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nr1h3Q9Z0Y9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nr1h3Q9Z0Y9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms