Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarcb1Q9Z0H3 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Gm13223-201ENSMUST00000118609 747 ntBASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smarcb1Q9Z0H3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Gm6888-201ENSMUST00000221983 706 ntBASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcb1Q9Z0H3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Mir7684-201ENSMUST00000183858 60 ntBASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Mir8102-201ENSMUST00000184148 139 ntBASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Gm27680-201ENSMUST00000184192 160 ntBASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Gm7063-201ENSMUST00000186840 981 ntBASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcb1Q9Z0H3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms