Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn8aQ9WTU3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Gm23547-201ENSMUST00000158210 271 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Gm14767-201ENSMUST00000121559 586 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Gm27430-201ENSMUST00000184585 107 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Gm44333-201ENSMUST00000197168 107 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Shd-206ENSMUST00000225145 998 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Scn8aQ9WTU3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Gm13453-201ENSMUST00000118708 357 ntBASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn8aQ9WTU3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn8aQ9WTU3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Mir7684-201ENSMUST00000183858 60 ntBASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gm44344-201ENSMUST00000200287 129 ntBASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn8aQ9WTU3 Gm27306-201ENSMUST00000183970 107 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms