Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx6Q9R1R0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.1□□□□□ -0.15
Lhx6Q9R1R0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx6Q9R1R0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx6Q9R1R0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lhx6Q9R1R0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lhx6Q9R1R0 Syt7-205ENSMUST00000224135 1557 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Mir466f-2-201ENSMUST00000104805 94 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Gm5177-201ENSMUST00000183092 997 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Gm28631-201ENSMUST00000190740 334 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Gm45525-201ENSMUST00000210800 389 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 AC129323.1-201ENSMUST00000216733 470 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Gm19189-201ENSMUST00000221689 754 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 AC154441.1-201ENSMUST00000223653 1006 ntBASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lhx6Q9R1R0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Lhx6Q9R1R0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.08□□□□□ -0.15
Lhx6Q9R1R0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx6Q9R1R0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx6Q9R1R0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx6Q9R1R0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm13223-201ENSMUST00000118609 747 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm27306-201ENSMUST00000183970 107 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm43630-201ENSMUST00000201550 776 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm34701-201ENSMUST00000204213 849 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Gm42736-201ENSMUST00000200723 1353 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.08□□□□□ -0.16
Lhx6Q9R1R0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx6Q9R1R0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms