Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trem1Q9JKE2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trem1Q9JKE2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gm715-201ENSMUST00000117865 831 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gm11336-201ENSMUST00000118168 334 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gm10653-202ENSMUST00000139570 835 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Odf3b-204ENSMUST00000227834 930 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trem1Q9JKE2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms