Protein–RNA interactions for Protein: Q9JJF3

Riox1, Ribosomal oxygenase 1, mousemouse

Predictions only

Length 603 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Riox1Q9JJF3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Riox1Q9JJF3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.4□□□□□ -0.27
Riox1Q9JJF3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Riox1Q9JJF3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.39□□□□□ -0.27
Riox1Q9JJF3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Gm8749-201ENSMUST00000117737 331 ntBASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Gm24513-201ENSMUST00000174964 138 ntBASIC13.38□□□□□ -0.27
Riox1Q9JJF3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Gm2756-201ENSMUST00000195851 400 ntBASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.38□□□□□ -0.27
Riox1Q9JJF3 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.38□□□□□ -0.27
Riox1Q9JJF3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Riox1Q9JJF3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms