Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cml3Q9JIY8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Gm29518-201ENSMUST00000190858 372 ntBASIC11.32□□□□□ -0.6
Cml3Q9JIY8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cml3Q9JIY8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Mir3081-201ENSMUST00000175305 84 ntBASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm10252-201ENSMUST00000209541 832 ntBASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cml3Q9JIY8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cml3Q9JIY8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms