Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1fQ9JIS7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Gm11524-201ENSMUST00000119349 807 ntBASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Gm18027-201ENSMUST00000218947 619 ntBASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Cacna1fQ9JIS7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacna1fQ9JIS7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Mir7085-201ENSMUST00000184353 66 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm6266-201ENSMUST00000203844 806 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm18062-201ENSMUST00000208020 547 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm18055-201ENSMUST00000208254 547 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.57■□□□□ 0.24
Cacna1fQ9JIS7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 BC037039-201ENSMUST00000192003 2205 ntBASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Mir7654-201ENSMUST00000185082 70 ntBASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cacna1fQ9JIS7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Gm12882-201ENSMUST00000121696 517 ntBASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cacna1fQ9JIS7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms