Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3bQ9ES34 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Gm27618-201ENSMUST00000183671 60 ntBASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3bQ9ES34 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Efs-202ENSMUST00000227037 2540 ntBASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3bQ9ES34 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.52■□□□□ 0.39
Ube3bQ9ES34 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3bQ9ES34 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3bQ9ES34 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3bQ9ES34 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm29310-201ENSMUST00000185468 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21825-201ENSMUST00000185728 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm29109-201ENSMUST00000185895 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21896-201ENSMUST00000186520 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21873-201ENSMUST00000186728 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21794-201ENSMUST00000187056 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21880-201ENSMUST00000187275 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21826-201ENSMUST00000187451 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21198-201ENSMUST00000188393 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21749-201ENSMUST00000189343 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21901-201ENSMUST00000189568 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm29424-201ENSMUST00000189716 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm28599-201ENSMUST00000189838 694 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21867-201ENSMUST00000189917 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm29269-201ENSMUST00000190087 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21722-201ENSMUST00000190153 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm28423-201ENSMUST00000190701 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21899-201ENSMUST00000190745 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21910-201ENSMUST00000191163 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21849-201ENSMUST00000191571 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm28678-201ENSMUST00000191593 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm20910-201ENSMUST00000193268 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm21871-201ENSMUST00000194621 696 ntBASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms