Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Stag1Q9D3E6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Gm9719-201ENSMUST00000162765 543 ntBASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Gm45098-201ENSMUST00000207179 657 ntBASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stag1Q9D3E6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Gm27680-201ENSMUST00000184192 160 ntBASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Gm44344-201ENSMUST00000200287 129 ntBASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stag1Q9D3E6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Gm24543-201ENSMUST00000103867 82 ntBASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Stag1Q9D3E6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Stag1Q9D3E6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms