Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nip7Q9CXK8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Gm6912-201ENSMUST00000117218 544 ntBASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Gm9182-201ENSMUST00000217829 639 ntBASIC18.32■□□□□ 0.52
Nip7Q9CXK8 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nip7Q9CXK8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Gm8515-201ENSMUST00000194852 576 ntBASIC18.31■□□□□ 0.52
Nip7Q9CXK8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Nip7Q9CXK8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gm9726-201ENSMUST00000180321 678 ntBASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gm18187-201ENSMUST00000196476 984 ntBASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nip7Q9CXK8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nip7Q9CXK8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms