Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gm17271-201ENSMUST00000165535 355 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gm10154-201ENSMUST00000084445 354 ntBASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retreg3Q9CQV4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm14126-201ENSMUST00000122345 395 ntBASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm42919-201ENSMUST00000197753 1284 ntBASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm18377-201ENSMUST00000215141 607 ntBASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Chchd1-203ENSMUST00000224633 557 ntBASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retreg3Q9CQV4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gm14057-201ENSMUST00000120631 482 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gm20553-201ENSMUST00000204205 844 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 AC125539.1-202ENSMUST00000226449 670 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms