Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.62□□□□□ -0.39
Smim3Q99PE5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.61□□□□□ -0.39
Smim3Q99PE5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.61□□□□□ -0.39
Smim3Q99PE5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Gm30025-201ENSMUST00000218555 728 ntBASIC12.61□□□□□ -0.39
Smim3Q99PE5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Celf4-206ENSMUST00000224553 1729 ntBASIC12.61□□□□□ -0.39
Smim3Q99PE5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.61□□□□□ -0.39
Smim3Q99PE5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.6□□□□□ -0.39
Smim3Q99PE5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gm10653-202ENSMUST00000139570 835 ntBASIC12.6□□□□□ -0.39
Smim3Q99PE5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.6□□□□□ -0.39
Smim3Q99PE5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smim3Q99PE5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smim3Q99PE5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Mir5130-201ENSMUST00000175160 84 ntBASIC12.59□□□□□ -0.39
Smim3Q99PE5 Gm27011-201ENSMUST00000182352 972 ntBASIC12.59□□□□□ -0.39
Smim3Q99PE5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.59□□□□□ -0.39
Smim3Q99PE5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smim3Q99PE5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms