Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gm37230-201ENSMUST00000194491 818 ntBASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpgs1Q99MS8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm44335-201ENSMUST00000196879 141 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm44297-201ENSMUST00000198304 141 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm44346-201ENSMUST00000198851 141 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.38■□□□□ 0.05
Tpgs1Q99MS8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Gm8396-201ENSMUST00000057361 823 ntBASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tpgs1Q99MS8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Carlr-201ENSMUST00000181515 2574 ntBASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Gm26308-201ENSMUST00000157768 69 ntBASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Gm43125-201ENSMUST00000201724 730 ntBASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tpgs1Q99MS8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms