Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf111Q99ML9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.36□□□□□ -0.11
Rnf111Q99ML9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Gm44771-201ENSMUST00000206975 626 ntBASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf111Q99ML9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Celf4-206ENSMUST00000224553 1729 ntBASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf111Q99ML9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms