Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Nkx6-1Q99MA9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-1Q99MA9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-1Q99MA9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-1Q99MA9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-1Q99MA9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-1Q99MA9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx6-1Q99MA9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Gm15653-201ENSMUST00000119247 907 ntBASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Gm11918-201ENSMUST00000121660 179 ntBASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx6-1Q99MA9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm5479-201ENSMUST00000160578 435 ntBASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm6266-201ENSMUST00000203844 806 ntBASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx6-1Q99MA9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Gm6007-201ENSMUST00000208170 823 ntBASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx6-1Q99MA9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms