Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.98□□□□□ -0.33
Scrt1Q99M85 Gm7653-201ENSMUST00000214567 508 ntBASIC12.98□□□□□ -0.33
Scrt1Q99M85 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gm6973-201ENSMUST00000117080 721 ntBASIC12.97□□□□□ -0.33
Scrt1Q99M85 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Mir8102-201ENSMUST00000184148 139 ntBASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gm6888-201ENSMUST00000221983 706 ntBASIC12.97□□□□□ -0.33
Scrt1Q99M85 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scrt1Q99M85 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.97□□□□□ -0.33
Scrt1Q99M85 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.96□□□□□ -0.33
Scrt1Q99M85 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.96□□□□□ -0.33
Scrt1Q99M85 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scrt1Q99M85 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.96□□□□□ -0.34
Scrt1Q99M85 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.96□□□□□ -0.34
Scrt1Q99M85 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Scrt1Q99M85 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms