Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm37973-201ENSMUST00000195767 1289 ntBASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 AC160962.2-201ENSMUST00000224761 632 ntBASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb20Q91XZ9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb20Q91XZ9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb20Q91XZ9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb20Q91XZ9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdhb20Q91XZ9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb20Q91XZ9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm14739-201ENSMUST00000120424 802 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gm10154-201ENSMUST00000084445 354 ntBASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb20Q91XZ9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gm43575-201ENSMUST00000196420 516 ntBASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb20Q91XZ9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdhb20Q91XZ9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms