Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb3Q91XZ7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb3Q91XZ7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb3Q91XZ7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb3Q91XZ7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb3Q91XZ7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb3Q91XZ7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb3Q91XZ7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Mir6404-201ENSMUST00000183699 94 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Mir8098-201ENSMUST00000184011 137 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gm44454-201ENSMUST00000198541 138 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb3Q91XZ7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms